"Logic models to classify cancer types based on tumor DNA samples", Masterarbeit, Nguyen Khoa Tran
2020
"Aggregieren von gerichteten azyklischen Graphen unter Verwendung von ganzzahliger linearer Programmierung", Bachelorarbeit, Max Oerter
"Using anticlustering to maximize diversity and dispersion: Comparing exact and heuristic approaches", Bachelorarbeit, Martin Breuer
"Solving Connected Dominating Set Variants Using Integer Linear Programming", Bachelorarbeit, Mario Surlemont
"Klassifizierung von Krebsarten durch Tumor-DNA mittels Support-Vektor-Maschinen und künstlichen neuronalen Netzen" Bachelorarbeit, Roman Jumatov
"Developing a Cytoscape app to solve k-cluster-editing using fast heuristics", Bachelorarbeit, Lukas Ettel
"k-mer Based Typing of Methicillin-Resistant Staphylococcus Aureus", Masterarbeit, Philipp Spohr
"Developing a Snakemake Workflow for Gene Set Enrichment Analysis", Bachelorarbeit, Lars Meinke
"A user-friendly Snakemake pipeline for differential expression analysis", Bachelorarbeit, Julian Kremer
"Solving the maximum allele co-occurrence problem for single individual haplotype phasing with Integer Linear Programming", Bachelorarbeit, Sarah Schweier
"Automated Immunophenotyping of Multi-Experimental Flow Cytometry Data", Masterarbeit, Manuel Lentzen
"Computing a Maximum Common Edge Subgraph of Two Molecular Graphs", Bachelorarbeit, Adrian Prinz
"Detection of somatic mutations and loss-of-heterozygosity events in a cohort of Glioblastoma patients", Bachelorarbeit, Sara Chantal Schulte
"Applying trio phasing to identify germline de novo mutations in children with cancer", Bachelorarbeit, Frederik Oehl
"Solving Dominating Set Using Answer Set Programming" Bachelorarbeit, My Ky Huynh
"Evaluating different methods for aircraft boarding" Bachelorarbeit, Hao Tian
"On a String Partitioning Problem" Bachelorarbeit, Michael Wulfert
"Contig-Assembly der MHC-Region mittels kräftebasierter Verfahren", Bachelorarbeit, Jan Höckesfeld
2019
"Contig-Assembly der MHC-Region mittels Linearer Programmierung", Bachelorarbeit, Marvin Lindemann
"Learning partial charges", Masterarbeit, Jakob Schlegel
"Vorhersage von Methicillin-resistenten Staphylococcus-aureus-Typen mittels Deep Learning", Bachelorarbeit, Andre Walter
"Assignment of partial charges to identical atom neighborhoods of drug-like molecules", Bachelorarbeit, Richard Michael Geller
"Solving the Maximum Weight Connected Subgraph Problem using Color Coding", Masterarbeit (VU Amsterdam), Eline van Mantgem
"Lagrangian Relaxation for the Generalized Robinson-Foulds Metric", Bachelorarbeit, Laura Christine Kühle
"Network analysis of heart infarction mice transcriptomes", Bachelorarbeit, Caroline Jachmann
2018
"Bestimmung des HLA-Genotyps auf Basis von genomweiter Sequenzierung und k-mer-Häufigkeiten", Bachelorarbeit, Yulian Martynovsky
"Creating similar item sets using integer linear programming with an application to questionnaire design in experimental psychology", Bachelorarbeit, Martin Papenberg
"Cluster Editing mit ganzzahliger linearer Programmierung: eine Open-Source-Lösung", Bachelorarbeit, Martin Klümpen
"Identifying significant targets of molecular fragments", Bachelorarbeit, Jonas Weber,
"Enrichment-Analyse viral deregulierter Signalmodule in Glioblastom-Zelllinien", Bachelorarbeit, Jonas König
"Das Maximum-Weight Connected Subgraph Problem auf Bäumen", Bachelorarbeit, Jan Seipp
"Visualisation of atom groups in molecuar graphs", Bachelorarbeit, Gareth Bilaney
"Pipeline zur Identifizierung funktionaler Module auf Basis von Onkoproteomikdaten", Bachelorarbeit, Anne Abraham
"Identifying functional modules in Arabidopsis thaliana root development", Bachelorarbeit, Felix Grünewald
2017
"Developing and evaluating a Cytoscape app for graph-based clustering", Bachelorarbeit, Philipp Spohr
